Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTCCCTTTCCATCCTGGCAG&TGCTGAAAAACCTGATGACTGGAATGAAGACACGGATGGAGAATGGGAGGC
(((((((((((((((((....&.)).)))))))))..)))))).
Details
MiRNAhsa-miR-5006-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1182,1233
Score1.0
Seed1
Au0.515
Energy-21.2
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure