Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGTTTGTAGCTTTGCTGGCATG&ATGATAGCAAATGCTAATAAGCCTG
((((((((((((((((((.(((.&))).))))))).)))).))))))).
Details
MiRNAhsa-miR-5087
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1549,1574
Score0.923
Seed1
Au0.632
Energy-21.5
Binding len25
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure