Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTCAGGGATTGGATGGAGG&CCTCCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTC
.((((((((((((((((.((((((&))))))))))))......................)))).)))))).
Details
MiRNAhsa-miR-5088-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1324,1370
Score0.846
Seed1
Au0.618
Energy-23.2
Binding len46
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure