Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCTTCTTCCTGGGCCCTCA&GAGGTGTTTGCTTGGGAGTTAAAAGCAAATGGCAACCAAAGCTCAGGACTGGGAG
((((....((((((((.....&.))))))))..)))).
Details
MiRNAhsa-miR-5088-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site134,189
Score0.923
Seed0
Au0.618
Energy-19.8
Binding len16
Me-13.815
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure