Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCGGGGCAGATTGGTGTAGGGTG&ACCTGAACTTTAATCAGTCTGCACATCCTGT
.((((((((((((((.((((((.&.))))))))))))))))....)))).
Details
MiRNAhsa-miR-5090
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2102,2133
Score0.846
Seed1
Au0.647
Energy-21.5
Binding len26
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure