Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCGGACCCATTTAAACCGGAG&GGTTGGCTGGATGGGTCTT
....(((((((((((((((....&))))...))))))))))).
Details
MiRNAhsa-miR-5188
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site413,432
Score0.923
Seed0
Au0.603
Energy-19.2
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure