Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGACTGAGCTGGAGCCA&TGGTTTGTACAGAACAAAATAATATGTAGCAGCTTCATTGCTATTGGAAAAATCAGTTATTGGA
(((((((((((((((((((..&.))))))..))...........))))))))))).
Details
MiRNAhsa-miR-5190
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2318,2382
Score0.923
Seed1
Au0.676
Energy-21.5
Binding len34
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure