Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGGTTTGGAATGGGATGG&CATCCCAAAACTGGAGTTTTCGAAGAGAAACATGCCAAACCTCCAG
((.(((((((((..(((((((.&)))))))...........................))))))))))).
Details
MiRNAhsa-miR-5194
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site799,845
Score0.865
Seed0
Au0.618
Energy-23.1
Binding len46
Me-7.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure