Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCCAGTTCTCTGAGGGGGCT&GGCCGCCGGCGGGACTGGT
..((((((((....((.((((&)))).))...)))))))).
Details
MiRNAhsa-miR-5195-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site17,36
Score0.923
Seed1
Au0.308
Energy-22.6
Binding len19
Me-13.275
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure