Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCCAGTTCTCTGAGGGGGCT&GGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTG
((((((((((((((((..(((&))).)))))))..................))))))))).
Details
MiRNAhsa-miR-5195-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1230,1269
Score0.923
Seed1
Au0.515
Energy-21.5
Binding len39
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure