Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGAAGGGGACGAGGGTTGGG&CCAAAATTTATCCCTGATCCTA
.((((.(((((.(((..((((.&))))..))).)))))..)))).
Details
MiRNAhsa-miR-5196-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1159,1181
Score0.846
Seed0
Au0.603
Energy-18.6
Binding len22
Me-9.274
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure