Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCATCCTCGTCTCCCTCCCAG&CTGGGTCAGAGGATGAGATGAA
((((.((((((((...(((((&)))))...))).))))))))).
Details
MiRNAhsa-miR-5196-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1940,1962
Score0.904
Seed0
Au0.574
Energy-20.2
Binding len22
Me-9.882
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure