Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGATCCCAGCGGTGCCTCT&GAGAGCACAGGATCTGGAG
(((((((((.....(((((((.&))).)))).))))))))).
Details
MiRNAhsa-miR-5100
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1972,1991
Score1.0
Seed1
Au0.544
Energy-20.9
Binding len19
Me-13.498
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure