Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTTGGGGTGCAGGGGTCTGCT&GGCAGCTGCTGAAGGGCACCCATGGCT
(((.((((((((.((.(((((&))))))).)).....))))))..))).
Details
MiRNAhsa-miR-5572
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1593,1620
Score0.846
Seed0
Au0.529
Energy-22.4
Binding len27
Me-8.492
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure