Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACATATGAAGTGAGCCAGCAC&GTTAAACCTGCTGGCTGGCTTGATGATGA
..(((((.((((.((((((((.&.)))))))).)))).))).)).
Details
MiRNAhsa-miR-5580-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1129,1158
Score1.0
Seed0
Au0.588
Energy-24.4
Binding len22
Me-8.56
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure