Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCCATGCCTCCTAGAAGTTCC&GGAATGAAGACACGGATGGAGAATGGGAGGCAC
.....(((((((((....((((&.))))..))))))))).
Details
MiRNAhsa-miR-5581-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1202,1235
Score0.923
Seed0
Au0.529
Energy-19.2
Binding len17
Me-14.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure