Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTCCCACTAATGCCAGC&GTTGGCTGGATGGGTCTTA
(((.(((((((..((((((&))))))))).)))).))).
Details
MiRNAhsa-miR-5588-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site414,433
Score0.846
Seed0
Au0.603
Energy-18.5
Binding len19
Me-11.606
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure