Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCACATGGCAACCTAGCTCCCA&TGGGAGTTAAAAGCAAATGGCAA
(((.(((.((....(((((((((&)))))))))...))..)))))).
Details
MiRNAhsa-miR-5589-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site146,169
Score0.846
Seed0
Au0.544
Energy-19.6
Binding len23
Me-17.601
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position5UTR
2D Structure