Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACAGATGCAGATTCTCTGACTTC&GGAGACCTCCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCC
....(((.((((((((((((....&.))))))))))))..))).
Details
MiRNAhsa-miR-5683
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1319,1368
Score0.846
Seed0
Au0.603
Energy-20.1
Binding len19
Me-11.86
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure