Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACAGATGCAGATTCTCTGACTTC&GAAGCAGATGAGAGCACAGGATCTGGAGATGG
..((..(.(((((((((((.((((&))))))))..........))))))).)..)).
Details
MiRNAhsa-miR-5683
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1963,1995
Score0.846
Seed0
Au0.529
Energy-17.4
Binding len32
Me-13.291
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure