Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACTCTAGCCTGAGCAACAG&GTTAAAAGCAAATGGCAACCAAAGCTCAGGACTGGGA
...((((((((((((.....&.))))))).))))).
Details
MiRNAhsa-miR-5684
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site151,188
Score0.923
Seed0
Au0.618
Energy-19.6
Binding len15
Me-6.748
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure