Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCGGAGAGAGAATGGGGAGC&GCTTTATGCCAGAGTGGTTTACCCCATTCACAAAATTTCTTATGCA
(((((((((((((((((...&.))))))))......)))))).))).
Details
MiRNAhsa-miR-5739
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2718,2764
Score0.923
Seed1
Au0.706
Energy-19.4
Binding len26
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure