Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGAGCCCGGGCCGCGCAG&CTGCGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGG
((((((((((((((((((((&)))))))))).....)))).))..............)))).
Details
MiRNAhsa-miR-1199-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site11,52
Score1.0
Seed1
Au0.324
Energy-30.7
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end8
Position5UTR
2D Structure