Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGCTATCCACTCCAGGTGTCC&GACACGGATGGAGAATGGGAGGCACCTC
(((.(((.(((((((((.(((((.&)))))...)))))..)))).))).))).
Details
MiRNAhsa-miR-6500-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1210,1238
Score0.923
Seed0
Au0.5
Energy-23.8
Binding len28
Me-9.283
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure