Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATTAGGTAGTGGCAGTGGAAC&GGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
....(((((((((((((((..&.)))..)))))))))))).
Details
MiRNAhsa-miR-6509-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site50,93
Score1.0
Seed0
Au0.441
Energy-22.2
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure