Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCAGAAGTGGGGCTGACAGG&CTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCC
..((((((.((..(((((((((.&))))))..)))...................)).)))))).
Details
MiRNAhsa-miR-6511a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site81,121
Score0.846
Seed1
Au0.456
Energy-22.1
Binding len40
Me-10.649
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings34
Pairings in 3prime end7
Position5UTR
2D Structure