Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCGGGGCAGGCGGCTGGGAGCG&TGCTGCGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGG
((((.(((.(((((((((.((((&)))).).)))))))).))..................).)))).
Details
MiRNAhsa-miR-6727-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site9,52
Score0.923
Seed0
Au0.324
Energy-29.4
Binding len43
Me-9.113
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end7
Position5UTR
2D Structure