Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAAAGGTGGAGGGGTTGTCAGA&CTGAGGAATGGGATGAAAGAGCAAAAATTCCTGATCCTTCTGCCGTCA
.((..(((((((((...(((((.&.)))))))))))))).)).
Details
MiRNAhsa-miR-6730-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1028,1076
Score0.846
Seed0
Au0.544
Energy-19.7
Binding len19
Me-11.913
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure