Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTCTGCCTGCATTCTACTCCCAG&TTGGGAGTTAAAAGCAAATGGCAA
....(((((((.((..((((((((&))))))))..)).)))...)))).
Details
MiRNAhsa-miR-6738-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site145,169
Score0.923
Seed0
Au0.544
Energy-20.7
Binding len24
Me-13.862
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position5UTR
2D Structure