Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCACTCTCCTGGCCCCCAG&TGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGAA
(((((((.((..((((((..&.))...))))..)).))))))).
Details
MiRNAhsa-miR-6777-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1225,1281
Score0.897
Seed1
Au0.559
Energy-23.6
Binding len23
Me-12.423
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure