Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGGGCTGGGTTTGGC&CTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGAAACCTCCCAT
.(((((((.((((((((.((.&)).))))))))............................))))))).
Details
MiRNAhsa-miR-6779-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1243,1290
Score0.846
Seed1
Au0.559
Energy-21.3
Binding len47
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure