Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGGAAGGGGCTGAGAACAGGA&TTGTAAACAAAGGAAGCCTCCTAGAGGATGTGGTTCCTCCTA
(((((((((((((((..........&.)))).)))...........)))))))).
Details
MiRNAhsa-miR-6797-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site944,986
Score0.846
Seed1
Au0.559
Energy-20.4
Binding len29
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure