Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACCTCTCCTGGCATCGCCCC&GGGCTGCAGATGGTTGGAGATGGA
..(((((((.(.((((((((.&))))....)))).).))))).)).
Details
MiRNAhsa-miR-6800-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1520,1544
Score0.846
Seed1
Au0.588
Energy-21.9
Binding len24
Me-9.546
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure