Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGCACCTGCCTCTCACCCACAG&CTGGAATGAAGACACGGATGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGG
(((((((((((((((((((...&.))).)..)))))))))..............................)).)))).
Details
MiRNAhsa-miR-6804-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1200,1272
Score0.846
Seed1
Au0.529
Energy-19.0
Binding len55
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end5
PositionCDS
2D Structure