Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACCTTGGCCCCTCTCCCCAG&CTGGGTCAGAGGATGAGATGAAAGAAGCAGATGAGAGCACAGGATCTGGAGATGGGCCGAT
....(((((((.(((((((..&.))....))))).))))))).
Details
MiRNAhsa-miR-6813-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1940,2001
Score0.923
Seed0
Au0.529
Energy-22.4
Binding len21
Me-12.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure