Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCTCTAACTGGCTTTCCCTGCA&GCAGATGAGAGCACAGGATCTGGAGATGGGCCG
.(((((...(((((((((.((((.&))))..)))))).)))...........))))).
Details
MiRNAhsa-miR-6822-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1966,1999
Score0.923
Seed0
Au0.529
Energy-23.8
Binding len33
Me-8.707
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure