Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCTCTAACTGGCTTTCCCTGCA&TGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGATGGGTCTT
((((((((.(((((((((((((((&)))))..............)))))))))).))))...)))).
Details
MiRNAhsa-miR-6822-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site390,432
Score0.808
Seed1
Au0.603
Energy-20.2
Binding len42
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure