Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTCCTGCTTCTGTTGCAG&CTGCGCGGCCGCCGGCGGGACTG
.(((((((((.(((.(((((&)))))))).....))))))))).
Details
MiRNAhsa-miR-6838-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site11,34
Score0.923
Seed1
Au0.302
Energy-21.6
Binding len23
Me-7.354
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure