Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTCCTGCTTCTGTTGCAG&GTAGCAGATCACTGGGCTG
.(((((....((((((((..&)))))))).....))))).
Details
MiRNAhsa-miR-6838-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1507,1526
Score0.846
Seed0
Au0.588
Energy-18.3
Binding len19
Me-9.95
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure