Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTGGATTGAAGAGACGACCCA&GTCCTTCATTTCAGAG
((((((.(((((.(((......&)))))))).)))))).
Details
MiRNAhsa-miR-6839-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2177,2193
Score0.846
Seed0
Au0.691
Energy-17.7
Binding len16
Me-6.77
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end2
Position3UTR
2D Structure