Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGGGATTGGGTCAGGCCAGT&GCTGGCTTGATGATGAACCAAAATTTATCCCTGAT
((((((((((((((((((((((&)))))))))))......)))......)))))))).
Details
MiRNAhsa-miR-6857-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1142,1177
Score0.923
Seed1
Au0.574
Energy-25.8
Binding len35
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings24
Pairings in 3prime end8
PositionCDS
2D Structure