Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCAGCCCCTGCTCACCCCT&AGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGG
(((((((((((((((.((.(((&)))..)))))))......)))))......))))).
Details
MiRNAhsa-miR-6858-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1502,1537
Score0.923
Seed1
Au0.588
Energy-20.5
Binding len35
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure