Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGGGAAGGTGGGAGAG&CTCCTATCAAACCTCCCA
..(((.(((...((((((((..&))))))))...)))))).
Details
MiRNAhsa-miR-6879-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site980,998
Score1.0
Seed0
Au0.588
Energy-21.9
Binding len18
Me-14.272
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure