Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCTGCCTCTCCTCTTGCCTGCAG&CTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCCAAGCAACAAAGAGGAGGTGTTTGCTTGGGAGTT
.(((.((((((((((((((((...&.)))))...........................))))))))).........)).))).
Details
MiRNAhsa-miR-6882-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site87,154
Score0.846
Seed0
Au0.515
Energy-22.2
Binding len58
Me-7.912
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position5UTR
2D Structure