Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGAGGGTGTGGTATGGATGT&TCCTATCAAACCTCCCA
.((((((...(((((.(((...&))))))))..)))))).
Details
MiRNAhsa-miR-6883-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site981,998
Score1.0
Seed1
Au0.588
Energy-20.1
Binding len17
Me-8.639
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure