Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGGACAGATGGAGAGGACA&TCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAA
(((((((...(((((.(((((..&.))))))))))...))))))).
Details
MiRNAhsa-miR-6887-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site962,999
Score1.0
Seed1
Au0.588
Energy-26.3
Binding len22
Me-8.783
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure