Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGAGATGCTCAGGCAGAT&GCCGCAAGAGAGCATCTGCCC
..((((((((((.(((....&)))......)))))))).)).
Details
MiRNAhsa-miR-6888-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site100,121
Score1.0
Seed1
Au0.456
Energy-17.7
Binding len21
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure