Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGCAGAGCCAGCTTCCTGA&CGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCCA
..((((((((((.((..((((.&.))))..))....).)).))))))).
Details
MiRNAhsa-miR-7843-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site47,122
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len26
Me-6.479
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure