Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCATGTATGATACTGCAAACA&TGTTTGATTCTATCAACAATTGAAAGTGTTGTATATGAC
.((((((((((((((.(((...&.)))..)))))))))))))).
Details
MiRNAhsa-miR-6516-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2487,2526
Score0.846
Seed1
Au0.706
Energy-15.8
Binding len21
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure