Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGGTAACTGTGATTTTTGCT&GCTTAAATTATAGATTCCTTTA
(((((...(((((((((..((.&))..)))))))))...))))).
Details
MiRNAhsa-miR-548ba
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2573,2595
Score0.846
Seed0
Au0.662
Energy-15.9
Binding len22
Me-9.696
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure